Forschungszentrum Landschaftsentwicklung und Bergbaulandschaften (FZLB)
Loop-loop electromagnetic induction (EMI) has proven to be efficient for fast and real-time soil apparent electrical conductivity (ECa) measurements. It is important to develop robust and accurate inversion strategies to obtain
soil electromagnetic conductivity image (EMCI) from ECa data. Moreover, obtaining an accurate nonlinear relationship between subsurface electrical conductivity (σ) and water content (θ) plays a key role for soil moisture monitoring using EMI. Here, we incorporated probabilistic inversion of multi-configuration ECa data with dimensionality reduction technique through the discrete cosine transform (DCT) using training image (TI)-based parametrization to retrieve soil EMCI. The ECa data were measured repeatedly along a 10 m transect using a CMD mini-Explorer sensor. Time-lapse reference data were collected as well to benchmark the inversion results and to find the in-situ relationship between σ and θ. To convert the inversely estimated timelapse EMCI to the soil moisture,we examined two approaches, namely, Rhoades et al. (1976) model and artificial neural network (ANN). The proposed inversion strategy estimated the soil EMCI with an excellent agreement with the reference counterpart. Moreover, the ANN approach demonstrated superiorities than the commonly used petrophysical model of Rhoades et al. (1976) to obtain spatiotemporal images of θ from time-lapse EMCI.
The results demonstrated that incorporation of the DCT-based probabilistic inversion of ECa data with the ANN approach offers a great promise for accurate characterization of the temporal wetting front and root zone soil moisture.
Low frequency loop-loop electromagnetic induction (EMI) is a widely-used geophysical measurement method to rapidly measure in situ the apparent electrical conductivity (ECa) of variably-saturated soils. Here, we couple Bayesian inversion of a quasi-two-dimensional electromagnetic (EM) model with image compression via the discrete cosine transform (DCT) for subsurface electrical conductivity (EC) imaging. The subsurface EC distributions are obtained from multi-configuration EMI data measured with a CMD-Explorer sensor along two transects in the Chicken Creek catchment (Brandenburg, Germany). Dipole-dipole electrical resistivity tomography (ERT) data are used to benchmark the inferred EC fields of both transects. We are especially concerned with the impact of the DCT truncation method on the accuracy and reliability of the inversely-estimated EC images. We contrast the results of two different truncation approaches for
model parametrization. The first scenario considers an arbitrary selection of the dominant DCT coefficients and their prior distributions (a commonly-used approach), while the second methodology benefits from geostatistical simulation of the EMI data pseudosection. This study demonstrates that DCT truncation based on geostatistical simulations facilitates a robust selection of the dominant DCT coefficients and their prior ranges, resulting in more accurate subsurface EC imaging from multi-configuration EMI data. Results based on geostatistical prior modeling present an excellent agreement between the EMI- and ERT-derived EC fields of the Chicken Creek catchment.
Exploring hydrological and ecological processes plays a key role in understanding ecosystem developments. In this respect, the constructed catchment, Chicken Creek, has been established for fundamental and interdisciplinary scientific research. Since 2005, an ongoing monitoring program has been launched to measure hydrological, biological, meteorological, and pedological parameters during the ecological development of the site. This comprehensive and multidisciplinary monitoring program has produced a diverse large data set. Handling such complex data for research purposes can be a cumbersome task. Consequently, we developed an online data portal (https://www.b-tu.de/chicken-creek/apps/datenportal/) to efficiently handle the data from Chicken Creek catchment. The portal was constructed using Shiny package of the R programming language. This platform provides a web-based data repository allowing for data discovery, download, visualization, and analysis. The data include time series of different parameters from installed sensors, data from laboratory analyses, vegetation data, data from sampling campaigns, and aerial photos. This platform demonstrates the relevancy and potentiality of the R-Shiny for constructing an online data portal to be used for multidisciplinary scientific purposes. The Chicken Creek
data portal thus provides a comprehensive and reliable database to give scientists a fast and easy access to all collected data.
Exploring hydrological and ecological processes plays a key role in understanding ecosystem development. In this respect, the constructed catchment, Chicken Creek (Hühnerwasser), has been established to promote fundamental and interdisciplinary scientific research. Since 2005, an on-going monitoring program has been established in this catchment to measure hydrological, biological, meteorological, and pedological parameters during the ecological development of the site. This comprehensive and multidisciplinary monitoring program has produced a large and diverse data set. Managing and exploring such a complex data set for research purposes can be a cumbersome task. As a consequence, we developed an online data portal https://www.b-tu.de/chicken-creek/apps/datenportal/ to efficiently handle the data from Chicken Creek catchment. The portal was constructed using R programming language, Shiny package, and the accompanying local Linux server. This platform allows for efficient data discovery, download, visualization, and analysis. Data visualizations are freely available, while data storage is limited to the authorized users. In comparison with the commonly used data base tools, R-Shiny offers several advantages. As an open source package, this platform allows for constructing a web data platform in an interactive way taking into account the complexity and diversity of the data. The flexibility of this routine enables to make an efficient user-demand data portal rather than relying on predetermined outputs. It also offers flexibility in data handling by using many different R packages, rendering versatile and extensive functionalities. R-Shiny is particularly powerful in terms of statistical analyses. Although the Chicken Creek online data portal is complete and available, new features, and extended capabilities are under active development. The Chicken Creek data portal provides a comprehensive and reliable database to give scientists a fast and easy access to all collected data.
Consequently, R-Shiny offers a great potential for future development of the web-based data portals to efficiently handle scientific data collected at different scales.
Ecosystems are characterized by high complexity and are dynamically changing by abiotic and biotic drivers such as climate, vegetation and soil fauna. Due to feedback processes between compartments, ecosystems show an inherent degree of locally heterogeneous properties and structures at multiple spatial and temporal scales.
The constructed catchment “Chicken Creek” represents a unique and outstanding site to study an ecosystem at the initial stage of development. The catchment is located about 20 km south of the city of Cottbus (Germany). The 6-ha catchment area was built in 2005 of coarse-textured quaternary sediments from the adjacent lignite mine and forms a back- and foot-slope that flattens out to a pond. A clay liner of 2-3 m thickness seals the catchment at the bottom, allowing for the formation of a local water body fed by precipitation. After construction the site was left to an unrestricted and unmanaged succession to elucidate the role of structures und processes during the initial establishment of an ecosystem. To study processes of ecosystem development and newly emerging structures the Chicken Creek catchment is equipped with a comprehensive ecological monitoring network. A network of more than 40 wells and two weirs allow for recording groundwater levels, surface runoff and discharge. Meteorological parameters are recorded at three weather stations. Annual aerial photos and vegetation monitoring reveal the floral colonisation of the area. Here, we present the 12 years of diverse and extensive monitoring program which has been launched to measure hydrological, biological, meteorological, and pedological parameters during the ecological development of the catchment area.
Machine learning to estimate soil moisture from geophysical measurements of electrical conductivity
(2019)
Soil water content (θ) is a key variable in different earth science disciplines since it mediates the water and energy exchange between the surface and atmosphere. Electrical and electromagnetic geophysical techniques have been widely used to estimate soil electrical conductivity (σ) and soil moisture. However, obtaining the σ − θ relationship is not straightforward due to the non-linearity and also dependency on many different soil and environmental properties. The purpose of this paper is to determine if artificial neural network is an appropriate machine learning technique for relating electrical conductivity to soil water content. In this respect, time-lapse electrical resistivity tomography measurements were carried out along a transect in the Chicken Creek catchment (Brandenburg, Germany). To ensure proper retrieval of the σ and θ, reference values were measured near the beginning of the transect via an excavated pit using 5TE capacitance sensors installed at different depths. We explored robustness and pertinence of the artificial neural network approach in comparison with Rhoades model (as a commonly used petrophysical relationship) to convert the inversely estimated σ from electrical resistivity tomography to the θ. The proposed approach was successfully validated and benchmarked by comparing the estimated values with the reference data. This study showed the superiority of the artificial neural network approach to the Rhoades model to obtain σ − θ relationship. In particular, artificial neural network allowed for more accurate estimation of the temporal wetting front than the petrophysical model. The proposed methodology thus offers a great promise for deriving spatiotemporal soil moisture patterns from geophysical data and obtaining the in situ σ − θ relationship, taking into account the non-linear variations of the soil moisture.
Low-frequency loop–loop electromagnetic induction (EMI) offers several key advantages over many other geophysical techniques for proximal soil sensing. Yet, because of problems with the inversion of measured apparent electrical conductivity (ECa) data, application of EMI for geophysical imaging and interpretation is limited. In this study, a Bayesian inference was used to obtain electromagnetic conductivity images (EMCIs) from multiconfiguration ECa data. This approach allows analysis of highly nonlinear problems and renders an ensemble of models obtained from the posterior distribution that can be used to explore parameter uncertainty. In this respect, generalized formal likelihood function was used to more accurately describe the sensitivity of the posterior distribution to residual assumptions. Discrete cosine transform (DCT) was employed as a model compression technique to reduce the number of unknown parameters in the inversion. The DCT parameterization was performed using training image (TI)-based geostatistical simulations considering the ECa data pseudosection as a TI. The potential of the proposed approach was examined through different theoretical scenarios. The estimated subsurface EMCI shows excellent agreement with the original synthetic models subject to the appropriate choice of prior information. Moreover, DCT parameterization reduces the number of unknown parameters, increasing accuracy of the inversion with the Bayesian procedure. The proposed approach ensures accurate and high-resolution characterization of subsurface conductivity layering from measured ECa values.